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Heterogeneous efflux pump expression underpins phenotypic resistance to antimicrobial peptides

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posted on 2025-12-02, 16:18 authored by Ka Kiu LeeKa Kiu Lee, Urszula LapinskaUrszula Lapinska, Giulia Tolle, Maureen MicalettoMaureen Micaletto, Bing Zhang, Wanida Phetsang, Anthony D Verderosa, Brandon M Invergo, Joseph Westley, Attila Bebes, Raif Yuecel, Paul A O'Neill, Audrey Farbos, Aaron JeffriesAaron Jeffries, Stineke Van HouteStineke Van Houte, Pierluigi Caboni, Mark AT Blaskovich, Benjamin HousdenBenjamin Housden, Krasimira TsanevaKrasimira Tsaneva, Stefano PagliaraStefano Pagliara
Antimicrobial resistance threatens the viability of modern medical interventions. There is a dire need to develop novel approaches to counter resistance mechanisms employed by starved or slow-growing pathogens that are refractory to conventional antimicrobial therapies. Antimicrobial peptides have been advocated as potential therapeutic solutions due to the low levels of genetic resistance observed in bacteria against these compounds. However, here we show that subpopulations of stationary phase Escherichia coli and Pseudomonas aeruginosa survive tachyplesin treatment without acquiring genetic mutations. These phenotypic variants display enhanced efflux activity to limit intracellular peptide accumulation. Differential regulation of genes involved in outer membrane vesicle secretion, membrane modification, and protease activity was also observed between phenotypically resistant and susceptible cells. We discovered that the formation of these phenotypic variants could be prevented by administering tachyplesin in combination with sertraline, a clinically used antidepressant, suggesting a novel approach for combatting antimicrobial-refractory stationary phase bacteria.<p></p>

Funding

Understanding molecular accumulation in single cells via microfluidics and omics

Biotechnology and Biological Sciences Research Council

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DYNBIOTICS - Understanding the dynamics of antibiotics transport in individual bacteria

UK Research and Innovation

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ERADIAMR

Medical Research Council

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EPSRC Hub for Quantitative Modelling in Healthcare

Engineering and Physical Sciences Research Council

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Identifying novel drugs to treat neurofibromatosis tumours using a unique combinatorial screening strategy

Medical Research Council

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Institutional Strategic Support Fund 2011/12.

Wellcome Trust

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Maximizing South West Biomedical Sequencing and Informatics Capability.

Wellcome Trust

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History

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Rights

© Copyright Lee et al. Open access. This article is distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use and redistribution provided that the original author and source are credited.

Rights Retention Status

  • Yes

Submission date

2024-06-11

Notes

This is the final version. Available on open access from eLife Sciences Publications via the DOI in this record. Data availability: All data generated or analysed during this study are included in the manuscript and supporting files; source data files have been provided for all figures; omics data have been deposited at https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1096674

Journal

eLife

Volume

13

Article Number

RP99752

Publisher

eLife Sciences Publications

Location

England

Version

  • Version of Record

Language

en

Department

  • Clinical and Biomedical Sciences
  • Ecology and Conservation
  • Biosciences