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Development of SNP markers derived from RAD sequencing for Atlantic salmon (Salmo salar L.) inhabiting the rivers of southern England

dc.contributor.authorKing, RA
dc.contributor.authorStevens, JR
dc.date.accessioned2021-10-05T14:35:45Z
dc.date.issued2021-05-20
dc.description.abstractThe rivers of the Hampshire Basin, southern England contain a genetically unique group of Atlantic salmon that have suffered dramatic declines in numbers over the last 40 years. Knowledge of levels and patterns of genetic diversity is essential for effective management of these vulnerable populations. Using restriction site-associated DNA sequencing (RADseq) data, we describe the development and characterisation of a panel of 94 single nucleotide polymorphism (SNP) loci for salmon from this region and investigate their applicability and variability in both target (i.e. southern English) and non-target populations. The SNP loci will be useful for population genetic and assignment studies on Atlantic salmon within the UK and beyond.en_GB
dc.description.sponsorshipEuropean Unionen_GB
dc.description.sponsorshipSouthern Wateren_GB
dc.identifier.citationPublished online 20 May 2021en_GB
dc.identifier.doi10.1007/s12686-021-01215-6
dc.identifier.urihttp://hdl.handle.net/10871/127356
dc.language.isoenen_GB
dc.publisherSpringeren_GB
dc.rights© The Author(s) 2021. Open Access. This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.en_GB
dc.subjectAtlantic salmonen_GB
dc.subjectconservation geneticsen_GB
dc.subjectmanagementen_GB
dc.subjectSalmo salaren_GB
dc.titleDevelopment of SNP markers derived from RAD sequencing for Atlantic salmon (Salmo salar L.) inhabiting the rivers of southern Englanden_GB
dc.typeArticleen_GB
dc.date.available2021-10-05T14:35:45Z
dc.identifier.issn1877-7252
dc.descriptionThis is the final version. Available on open access from Springer via the DOI in this recorden_GB
dc.descriptionData availability: SNP genotypes are available upon request from the lead author.en_GB
dc.identifier.journalConservation Genetics Resourcesen_GB
dc.rights.urihttps://creativecommons.org/licenses/by/4.0/en_GB
dcterms.dateAccepted2021-05-13
exeter.funder::European Commissionen_GB
rioxxterms.versionVoRen_GB
rioxxterms.licenseref.startdate2021-05-20
rioxxterms.typeJournal Article/Reviewen_GB
refterms.dateFCD2021-10-05T14:34:05Z
refterms.versionFCDVoR
refterms.dateFOA2021-10-05T14:35:54Z
refterms.panelAen_GB


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© The Author(s) 2021. Open Access. This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.
Except where otherwise noted, this item's licence is described as © The Author(s) 2021. Open Access. This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.