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dc.contributor.authorParkin, C
dc.date.accessioned2024-05-14T14:00:06Z
dc.date.issued2024-05-20
dc.date.updated2024-05-14T12:22:03Z
dc.description.abstractCandida albicans is an opportunistic human fungal pathogen, capable of causing severe disease in immunocompromised individuals. In addition, the fungus causes millions of mucosal infections in predisposed people, particularly women of child-bearing age. Treatment options for such diseases are limited due to the increasing number of strains resistant to antifungal drug treatment, and the ability of the fungus to evade clearance by the innate immune system. The ability of C. albicans to switch to polarised hyphal growth, in addition to responding to external stresses induced by drug treatment and the immune response, allows C. albicans to survive and prolong infection. How such stress signals are sensed in fungi, however, is not fully understood. Calcium (Ca2+) is an essential trace element required in all eukaryotic organisms and is used a second messenger to activate intracellular signalling pathways. In fungi, however, Ca2+ dynamics, and its role in stress adaptation and cell biology, are not fully understood due to the lack of suitable Ca2+ reporters that can accurately visualise Ca2+ dynamics at the single cell level. To overcome this problem, we engineered the single cell Ca2+ reporter, GCaMP6f, to visualise cytosolic Ca2+ dynamics in C. albicans at the single cell level for the first time. Chapter 3 describes the general optimisation of the GCaMP6 reporter in C. albicans, which included generating a panel of GCaMP expressing strains for future work in the thesis. Optimal experimental conditions were established, where GCaMP outputs were found to be both dependent on the pH and Ca2+ concentration of the external medium. By also imaging an empty vector control strain in a microfluidics system, GCaMP dependent signals were characterised using bespoke software, which were termed Ca2+ GCaMP spikes due to their transient profile within individual cells. By imaging Ca2+ GCaMP spikes at higher speeds, complete spike signatures were characterised in C. albicans, which lasted for ∼ 5 s. In Chapter 4, we used common stress compounds (0.05 % SDS, 1 M NaCl and 5 mM H2O2), at concentrations previously established in the fungal literature, to visualise immediate GCaMP responses to stress, as well as longer term adaptation responses over repeated exposures. Exposure to osmotic shock caused no adaptive response, however 1 M NaCl led to an inhibition of Ca2+ GCaMP spiking, whereas an equimolar level of 0.6 M CaCl2 caused increased levels of spiking, but with the same level of cell shrinkage. Treatment with 0.05 % SDS elicited a Ca2+ GCaMP dependent spike burst across the cell population, as well as a more prolonged increase in GCaMP fluorescence, which was associated with an increase in cytosolic Ca2+, followed by auto-fluorescent signals that indicated high levels of cell death. Surviving cells adapted over repeated exposures, which required calcineurin; increased protection to SDS was also provided by removing external Ca2+, suggesting adaptation to SDS was caused by remodelling of the damaged plasma membrane to prevent unregulated Ca2+ influx. Treatment with 5 mM H2O2 suppressed Ca2+ GCaMP spiking and caused population wide auto 6fluorescence, however cells adapted to repeated exposures. Adaptation was dependent on Cap1, Cch1 and calcineurin, but not the calcineurin target, Crz1, Hog1, or Yvc1. This suggested a pre-adapted state in the absence of these proteins, potentially due to membrane permeability altering the diffusion of H2O2 across the plasma membrane into the cytosol. In Chapter 5, the validated GCaMP reporter was used to investigate Ca2+ homeostasis in C. albicans, by characterising a novel TRP-like channel, Fgr29, that plays a role in Ca2+ homeostasis. Novel AlphaFold software predicted a homo-tetrameric structure for Fgr29, similar to other characterised TRP channels, such as Yvc1. Ca2+ GCaMP signals in the fgr29∆ strain were consistently higher than in WT cells, suggesting that Fgr29 regulates cytosolic Ca2+ homeostasis. The fgr29∆ strain displayed alternative stress response signatures, compared to WT, which were consistent with constitutive activation of stress response pathways, such as the calcineurin and CWI pathways, and resistance to stress. Phenotypic assays revealed that the absence of Fgr29 promoted resistance to myriocin, an inhibitor of the sphingolipid biosynthesis pathway. Fgr29 may therefore localise to the ER, and mutants lacking Fgr29 may have an alternate sphingolipid profile in the plasma membrane. In Chapter 6, GCaMP6 was imaged in C. albicans hyphae, the invasive form of C. albicans, often associated with disease and toxin production. Ca2+ GCaMPsignals in hyphae were more prolonged than the spikes observed in yeast cells, and occurred independently within individual hyphal compartments. The signals were also biased towards the apical hyphal cell suggesting an increased requirement for Ca2+ in the metabolically active cell, perhaps for Golgi-localised enzymes, calcineurin dependent cell cycle effectors, and actin polymerisation. Examination of Ca2+ flux during contact-associated events in hyphal cells was limited due to growth being limited by the system and also high frame rate imaging. Overall, the development of the GCaMP6 reporter has allowed the investigation of Ca2+ dynamics at the single cell level in C. albicans for the first time. Compared to previous approaches, the use of GCaMP6 has revealed the dynamics of Ca2+ influx and regulation and the role in temporal stress response signatures and adaptation.en_GB
dc.identifier.urihttp://hdl.handle.net/10871/135938
dc.publisherUniversity of Exeteren_GB
dc.rights.embargoreasonUnder embargo until 13/11/25. Data in the thesis still to be publisheden_GB
dc.subjectC albicansen_GB
dc.subjectMedical Mycologyen_GB
dc.subjectCalciumen_GB
dc.subjectmicrobiologyen_GB
dc.subjectMicroscopyen_GB
dc.titleCalcium flux and dynamics during growth and stress responses in the human fungal pathogen Candida albicansen_GB
dc.typeThesis or dissertationen_GB
dc.date.available2024-05-14T14:00:06Z
dc.contributor.advisorBrand, Alexandra
dc.publisher.departmentFaculty of Health and Life Sciences
dc.rights.urihttp://www.rioxx.net/licenses/all-rights-reserveden_GB
dc.type.degreetitlePhD in Biological Sciences
dc.type.qualificationlevelDoctoral
dc.type.qualificationnameDoctoral Thesis
rioxxterms.versionNAen_GB
rioxxterms.licenseref.startdate2024-05-20
rioxxterms.typeThesisen_GB


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