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dc.contributor.authorAvitabile, D
dc.contributor.authorWedgwood, KCA
dc.date.accessioned2016-12-05T14:02:13Z
dc.date.issued2017-02-01
dc.description.abstractWe study coarse pattern formation in a cellular automaton modelling a spatially-extended stochastic neural network. The model, originally proposed by Gong and Robinson, is known to support stationary and travelling bumps of localised activity. We pose the model on a ring and study the existence and stability of these patterns in various limits using a combination of analytical and numerical techniques. In a purely deterministic version of the model, posed on a continuum, we construct bumps and travelling waves analytically using standard interface methods from neural field theory. In a stochastic version with Heaviside firing rate, we construct approximate analytical probability mass functions associated with bumps and travelling waves. In the full stochastic model posed on a discrete lattice, where a coarse analytic description is unavailable, we compute patterns and their linear stability using equation-free methods. The lifting procedure used in the coarse time-stepper is informed by the analysis in the deterministic and stochastic limits. In all settings, we identify the synaptic profile as a mesoscopic variable, and the width of the corresponding activity set as a macroscopic variable. Stationary and travelling bumps have similar meso- and macroscopic profiles, but different microscopic structure, hence we propose lifting operators which use microscopic motifs to disambiguate between them. We provide numerical evidence that waves are supported by a combination of high synaptic gain and long refractory times, while meandering bumps are elicited by short refractory times.en_GB
dc.description.sponsorshipKyle Wedgwood was generously supported by the Wellcome Trust Institutional Strategic Support Award (WT105618MA)en_GB
dc.identifier.citationFirst Online: 01 February 2017en_GB
dc.identifier.doi10.1007/s00285-016-1070-9
dc.identifier.urihttp://hdl.handle.net/10871/24737
dc.language.isoenen_GB
dc.publisherSpringer Verlagen_GB
dc.rights© The Author(s) 2017. Open Access. This article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made.
dc.subjectmultiple scale analysisen_GB
dc.subjectmathematical neuroscienceen_GB
dc.subjectrefractorinessen_GB
dc.subjectspatio-temporal patternsen_GB
dc.subjectequation-free modellingen_GB
dc.subjectMarkov chainsen_GB
dc.titleMacroscopic coherent structures in a stochastic neural network: from interface dynamics to coarse-grained bifurcation analysisen_GB
dc.typeArticleen_GB
dc.identifier.issn0303-6812
dc.descriptionThis is the author accepted manuscript. The final version is available from Springer Verlag via the DOI in this record.
dc.identifier.journalJournal of Mathematical Biologyen_GB


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