Show simple item record

Single-cell microfluidics facilitates the rapid quantification of antibiotic accumulation in Gram-negative bacteria (Model & Matlab Code)

dc.contributor.authorCama, J
dc.contributor.authorVoliotis, M
dc.contributor.authorMetz, J
dc.contributor.authorSmith, A
dc.contributor.authorIannucci, J
dc.contributor.authorKeyser, U
dc.contributor.authorTsaneva-Atanasova, K
dc.contributor.authorPagliara, S
dc.date.accessioned2020-06-25T13:14:24Z
dc.date.issued2020-06-25
dc.description.abstractThis is the code used for the Cama et al. (2020) article "Single-cell microfluidics facilitates the rapid quantification of antibiotic accumulation in Gram-negative bacteria" published in Lab on a Chip.en_GB
dc.description.sponsorshipWellcome Trusten_GB
dc.description.sponsorshipEngineering and Physical Sciences Research Council (EPSRC)en_GB
dc.description.sponsorshipBiotechnology and Biological Sciences Research Council (BBSRC)en_GB
dc.description.sponsorshipEuropean Union Horizon 2020en_GB
dc.description.sponsorshipMedical Research Council (MRC)en_GB
dc.description.sponsorshipRoyal Societyen_GB
dc.description.sponsorshipWellcome Trusten_GB
dc.description.sponsorshipBiotechnology and Biological Sciences Research Council (BBSRC)en_GB
dc.description.sponsorshipEuropean Research Commission (ERC)en_GB
dc.description.sponsorshipUniversity of Exeter School of Biosciencesen_GB
dc.description.sponsorshipGW4 Initiator awarden_GB
dc.identifier.grantnumber204909/Z/16/Zen_GB
dc.identifier.grantnumberEP/N014391/1en_GB
dc.identifier.grantnumberBB/M009122/1en_GB
dc.identifier.grantnumberH2020-MSCA-ITN-2015-675752en_GB
dc.identifier.grantnumberMCPC17189en_GB
dc.identifier.grantnumberRG180007en_GB
dc.identifier.grantnumberWT097835/Z/11/Zen_GB
dc.identifier.grantnumberBB/S017674/1en_GB
dc.identifier.grantnumber647144en_GB
dc.identifier.urihttp://hdl.handle.net/10871/121661
dc.language.isoenen_GB
dc.publisherUniversity of Exeteren_GB
dc.relation.urlhttp://hdl.handle.net/10871/121477en_GB
dc.rightsGNU General Public Licence 3.0en_GB
dc.titleSingle-cell microfluidics facilitates the rapid quantification of antibiotic accumulation in Gram-negative bacteria (Model & Matlab Code)en_GB
dc.typeSoftwareen_GB
dc.date.available2020-06-22en_GB
dc.date.available2020-06-25T13:14:24Z
pubs.notesNot knownen_GB
dc.descriptionThe MATLAB code provided implements: 1) an ODE based model of drug transport across the Gram-negative cell envelope. The model is described in detail in the publication "Single-cell microfluidics facilitates the rapid quantification of antibiotic accumulation in Gram-negative bacteria.” 2) an MCMC algorithm (Gibbs sampler) for inferring parameters of the model from single cell data. The algorithm is describe in detail in supplementary information accompanying the publication "Single-cell microfluidics facilitates the rapid quantification of antibiotic accumulation in Gram-negative bacteria.”en_GB
dc.descriptionThe article associated with this dataset is located in ORE at: http://hdl.handle.net/10871/121477en_GB
dc.rights.urihttps://choosealicense.com/licenses/gpl-3.0en_GB
rioxxterms.versionNAen_GB
rioxxterms.licenseref.startdate2020-06-25
rioxxterms.typeOtheren_GB
refterms.dateFOA2020-06-25T13:14:29Z


Files in this item

Name:
code.zip
Size:
2.359Mb
Format:
ZIP
View/Open

This item appears in the following Collection(s)

Show simple item record