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The Ontologies Community of Practice: A CGIAR Initiative for Big Data in Agrifood Systems

dc.contributor.authorArnaud, E
dc.contributor.authorLaporte, M-A
dc.contributor.authorKim, S
dc.contributor.authorAubert, C
dc.contributor.authorLeonelli, S
dc.contributor.authorMiro, B
dc.contributor.authorCooper, L
dc.contributor.authorJaiswal, P
dc.contributor.authorKruseman, G
dc.contributor.authorShrestha, R
dc.contributor.authorButtigieg, PL
dc.contributor.authorMungall, CJ
dc.contributor.authorPietragalla, J
dc.contributor.authorAgbona, A
dc.contributor.authorMuliro, J
dc.contributor.authorDetras, J
dc.contributor.authorHualla, V
dc.contributor.authorRathore, A
dc.contributor.authorDas, RR
dc.contributor.authorDieng, I
dc.contributor.authorBauchet, G
dc.contributor.authorMenda, N
dc.contributor.authorPommier, C
dc.contributor.authorShaw, F
dc.contributor.authorLyon, D
dc.contributor.authorMwanzia, L
dc.contributor.authorJuarez, H
dc.contributor.authorBonaiuti, E
dc.contributor.authorChiputwa, B
dc.contributor.authorObileye, O
dc.contributor.authorAuzoux, S
dc.contributor.authorYeumo, ED
dc.contributor.authorMueller, LA
dc.contributor.authorSilverstein, K
dc.contributor.authorLafargue, A
dc.contributor.authorAntezana, E
dc.contributor.authorDevare, M
dc.contributor.authorKing, B
dc.date.accessioned2020-09-28T09:28:07Z
dc.date.issued2020-09-25
dc.description.abstractHeterogeneous and multidisciplinary data generated by research on sustainable global agriculture and agrifood systems requires quality data labeling or annotation in order to be interoperable. As recommended by the FAIR principles, data, labels, and metadata must use controlled vocabularies and ontologies that are popular in the knowledge domain and commonly used by the community. Despite the existence of robust ontologies in the Life Sciences, there is currently no comprehensive full set of ontologies recommended for data annotation across agricultural research disciplines. In this paper, we discuss the added value of the Ontologies Community of Practice (CoP) of the CGIAR Platform for Big Data in Agriculture for harnessing relevant expertise in ontology development and identifying innovative solutions that support quality data annotation. The Ontologies CoP stimulates knowledge sharing among stakeholders, such as researchers, data managers, domain experts, experts in ontology design, and platform development teams.en_GB
dc.description.sponsorshipNational Science Foundation (NSF)en_GB
dc.description.sponsorshipBiotechnology and Biological Sciences Research Council (BBSRC)en_GB
dc.description.sponsorshipBiotechnology and Biological Sciences Research Council (BBSRC)en_GB
dc.description.sponsorshipBiotechnology and Biological Sciences Research Council (BBSRC)en_GB
dc.description.sponsorshipBiotechnology and Biological Sciences Research Council (BBSRC)en_GB
dc.description.sponsorshipBiotechnology and Biological Sciences Research Council (BBSRC)en_GB
dc.description.sponsorshipBiotechnology and Biological Sciences Research Council (BBSRC)en_GB
dc.description.sponsorshipEngineering and Physical Sciences Research Council (EPSRC)en_GB
dc.description.sponsorshipFrench National Research Agencyen_GB
dc.description.sponsorshipEuropean Unionen_GB
dc.description.sponsorshipEuropean Union Horizon 2020en_GB
dc.identifier.citationPublished online 25 September 2020en_GB
dc.identifier.doi10.1016/j.patter.2020.100105
dc.identifier.grantnumberIOS:1340112en_GB
dc.identifier.grantnumberBB/L024055/1en_GB
dc.identifier.grantnumberBB/L024101/1en_GB
dc.identifier.grantnumberBB/L024071/1en_GB
dc.identifier.grantnumberBBS/E/T/000PR9817en_GB
dc.identifier.grantnumberBB/M018431/1en_GB
dc.identifier.grantnumberBB/R000662/1en_GB
dc.identifier.grantnumberEP/N510129/1en_GB
dc.identifier.grantnumberANR-11-INBS-0012en_GB
dc.identifier.grantnumber283496en_GB
dc.identifier.grantnumber676559en_GB
dc.identifier.urihttp://hdl.handle.net/10871/123011
dc.language.isoenen_GB
dc.publisherElsevieren_GB
dc.rightsThis is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).en_GB
dc.subjectontologiesen_GB
dc.subjectagricultureen_GB
dc.subjectagrifood systemsen_GB
dc.subjectBig Dataen_GB
dc.subjectFAIR dataen_GB
dc.subjectdata annotationen_GB
dc.subjectsemantics for agricultureen_GB
dc.subjectCommunity of Practiceen_GB
dc.subjectdata labelingen_GB
dc.subjectknowledge representationen_GB
dc.titleThe Ontologies Community of Practice: A CGIAR Initiative for Big Data in Agrifood Systemsen_GB
dc.typeArticleen_GB
dc.date.available2020-09-28T09:28:07Z
dc.identifier.issn2666-3899
exeter.article-number100105en_GB
dc.descriptionThis is the final version. Available from Elsevier via the DOI in this record. en_GB
dc.descriptionAll data held in the form of draft and final ontologies produced by the Ontologies CoP are accessible online on public repositories managing versioning—mainly in GitHub repositories. Final versions of the ontologies are published with a cc-by license.en_GB
dc.identifier.journalPatternsen_GB
dc.rights.urihttps://creativecommons.org/licenses/by-nc-nd/4.0/en_GB
dcterms.dateAccepted2020-08-24
exeter.funder::Alan Turing Instituteen_GB
rioxxterms.versionVoRen_GB
rioxxterms.licenseref.startdate2020-08-24
rioxxterms.typeJournal Article/Reviewen_GB
refterms.dateFCD2020-09-28T09:15:50Z
refterms.versionFCDVoR
refterms.dateFOA2020-09-28T09:28:13Z
refterms.panelCen_GB


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This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
Except where otherwise noted, this item's licence is described as This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).