dc.contributor.author | Williamson, A | |
dc.contributor.author | Norris, DM | |
dc.contributor.author | Yin, X | |
dc.contributor.author | Broadaway, KA | |
dc.contributor.author | Moxley, AH | |
dc.contributor.author | Vadlamudi, S | |
dc.contributor.author | Wilson, EP | |
dc.contributor.author | Jackson, AU | |
dc.contributor.author | Ahuja, V | |
dc.contributor.author | Andersen, MK | |
dc.contributor.author | Arzumanyan, Z | |
dc.contributor.author | Bonnycastle, LL | |
dc.contributor.author | Bornstein, SR | |
dc.contributor.author | Bretschneider, MP | |
dc.contributor.author | Buchanan, TA | |
dc.contributor.author | Chang, Y-C | |
dc.contributor.author | Chuang, L-M | |
dc.contributor.author | Chung, R-H | |
dc.contributor.author | Clausen, TD | |
dc.contributor.author | Damm, P | |
dc.contributor.author | Delgado, GE | |
dc.contributor.author | de Mello, VD | |
dc.contributor.author | Dupuis, J | |
dc.contributor.author | Dwivedi, OP | |
dc.contributor.author | Erdos, MR | |
dc.contributor.author | Silva, LF | |
dc.contributor.author | Frayling, TM | |
dc.contributor.author | Gieger, C | |
dc.contributor.author | Goodarzi, MO | |
dc.contributor.author | Guo, X | |
dc.contributor.author | Gustafsson, S | |
dc.contributor.author | Hakaste, L | |
dc.contributor.author | Hammar, U | |
dc.contributor.author | Hatem, G | |
dc.contributor.author | Herrmann, S | |
dc.contributor.author | Højlund, K | |
dc.contributor.author | Horn, K | |
dc.contributor.author | Hsueh, WA | |
dc.contributor.author | Hung, Y-J | |
dc.contributor.author | Hwu, C-M | |
dc.contributor.author | Jonsson, A | |
dc.contributor.author | Kårhus, LL | |
dc.contributor.author | Kleber, ME | |
dc.contributor.author | Kovacs, P | |
dc.contributor.author | Lakka, TA | |
dc.contributor.author | Lauzon, M | |
dc.contributor.author | Lee, I-T | |
dc.contributor.author | Lindgren, CM | |
dc.contributor.author | Lindström, J | |
dc.contributor.author | Linneberg, A | |
dc.contributor.author | Liu, C-T | |
dc.contributor.author | Luan, J | |
dc.contributor.author | Aly, DM | |
dc.contributor.author | Mathiesen, E | |
dc.contributor.author | Moissl, AP | |
dc.contributor.author | Morris, AP | |
dc.contributor.author | Narisu, N | |
dc.contributor.author | Perakakis, N | |
dc.contributor.author | Peters, A | |
dc.contributor.author | Prasad, RB | |
dc.contributor.author | Rodionov, RN | |
dc.contributor.author | Roll, K | |
dc.contributor.author | Rundsten, CF | |
dc.contributor.author | Sarnowski, C | |
dc.contributor.author | Savonen, K | |
dc.contributor.author | Scholz, M | |
dc.contributor.author | Sharma, S | |
dc.contributor.author | Stinson, SE | |
dc.contributor.author | Suleman, S | |
dc.contributor.author | Tan, J | |
dc.contributor.author | Taylor, KD | |
dc.contributor.author | Uusitupa, M | |
dc.contributor.author | Vistisen, D | |
dc.contributor.author | Witte, DR | |
dc.contributor.author | Walther, R | |
dc.contributor.author | Wu, P | |
dc.contributor.author | Xiang, AH | |
dc.contributor.author | Zethelius, B | |
dc.contributor.author | Meta-Analysis of Glucose and Insulin-related Traits Consortium (MAGIC) | |
dc.contributor.author | Ahlqvist, E | |
dc.contributor.author | Bergman, RN | |
dc.contributor.author | Chen, Y-DI | |
dc.contributor.author | Collins, FS | |
dc.contributor.author | Fall, T | |
dc.contributor.author | Florez, JC | |
dc.contributor.author | Fritsche, A | |
dc.contributor.author | Grallert, H | |
dc.contributor.author | Groop, L | |
dc.contributor.author | Hansen, T | |
dc.contributor.author | Koistinen, HA | |
dc.contributor.author | Komulainen, P | |
dc.contributor.author | Laakso, M | |
dc.contributor.author | Lind, L | |
dc.contributor.author | Loeffler, M | |
dc.contributor.author | März, W | |
dc.contributor.author | Meigs, JB | |
dc.contributor.author | Raffel, LJ | |
dc.contributor.author | Rauramaa, R | |
dc.contributor.author | Rotter, JI | |
dc.contributor.author | Schwarz, PEH | |
dc.contributor.author | Stumvoll, M | |
dc.contributor.author | Sundström, J | |
dc.contributor.author | Tönjes, A | |
dc.contributor.author | Tuomi, T | |
dc.contributor.author | Tuomilehto, J | |
dc.contributor.author | Wagner, R | |
dc.contributor.author | Barroso, I | |
dc.contributor.author | Walker, M | |
dc.contributor.author | Grarup, N | |
dc.contributor.author | Boehnke, M | |
dc.contributor.author | Wareham, NJ | |
dc.contributor.author | Mohlke, KL | |
dc.contributor.author | Wheeler, E | |
dc.contributor.author | O'Rahilly, S | |
dc.contributor.author | Fazakerley, DJ | |
dc.contributor.author | Langenberg, C | |
dc.date.accessioned | 2023-06-19T13:58:53Z | |
dc.date.issued | 2023-06-08 | |
dc.date.updated | 2023-06-19T10:42:43Z | |
dc.description.abstract | Distinct tissue-specific mechanisms mediate insulin action in fasting and postprandial states. Previous genetic studies have largely focused on insulin resistance in the fasting state, where hepatic insulin action dominates. Here we studied genetic variants influencing insulin levels measured 2 h after a glucose challenge in >55,000 participants from three ancestry groups. We identified ten new loci (P < 5 × 10-8) not previously associated with postchallenge insulin resistance, eight of which were shown to share their genetic architecture with type 2 diabetes in colocalization analyses. We investigated candidate genes at a subset of associated loci in cultured cells and identified nine candidate genes newly implicated in the expression or trafficking of GLUT4, the key glucose transporter in postprandial glucose uptake in muscle and fat. By focusing on postprandial insulin resistance, we highlighted the mechanisms of action at type 2 diabetes loci that are not adequately captured by studies of fasting glycemic traits. | en_GB |
dc.description.sponsorship | Swedish Research Council | en_GB |
dc.description.sponsorship | Novo Nordisk Foundation | en_GB |
dc.description.sponsorship | National Institute of Health | en_GB |
dc.description.sponsorship | National Institute of Health | en_GB |
dc.description.sponsorship | National Institute of Health | en_GB |
dc.description.sponsorship | National Health Research Institutes, Taiwan | en_GB |
dc.description.sponsorship | National Health Research Institutes, Taiwan | en_GB |
dc.description.sponsorship | National Health Research Institutes, Taiwan | en_GB |
dc.description.sponsorship | National Science Council, Taiwan | en_GB |
dc.description.sponsorship | National Science Council, Taiwan | en_GB |
dc.description.sponsorship | National Science Council, Taiwan | en_GB |
dc.description.sponsorship | National Science Council, Taiwan | en_GB |
dc.description.sponsorship | Taichung Veterans General Hospital, Taiwan | en_GB |
dc.description.sponsorship | Taichung Veterans General Hospital, Taiwan | en_GB |
dc.description.sponsorship | Taichung Veterans General Hospital, Taiwan | en_GB |
dc.description.sponsorship | Taichung Veterans General Hospital, Taiwan | en_GB |
dc.description.sponsorship | Taichung Veterans General Hospital, Taiwan | en_GB |
dc.description.sponsorship | Taichung Veterans General Hospital, Taiwan | en_GB |
dc.description.sponsorship | Taichung Veterans General Hospital, Taiwan | en_GB |
dc.description.sponsorship | Taichung Veterans General Hospital, Taiwan | en_GB |
dc.description.sponsorship | Taichung Veterans General Hospital, Taiwan | en_GB |
dc.description.sponsorship | Taichung Veterans General Hospital, Taiwan | en_GB |
dc.description.sponsorship | Taichung Veterans General Hospital, Taiwan | en_GB |
dc.description.sponsorship | Taichung Veterans General Hospital, Taiwan | en_GB |
dc.description.sponsorship | Taichung Veterans General Hospital, Taiwan | en_GB |
dc.description.sponsorship | Taichung Veterans General Hospital, Taiwan | en_GB |
dc.description.sponsorship | Taichung Veterans General Hospital, Taiwan | en_GB |
dc.description.sponsorship | Taichung Veterans General Hospital, Taiwan | en_GB |
dc.description.sponsorship | Taichung Veterans General Hospital, Taiwan | en_GB |
dc.description.sponsorship | National Institute of Health | en_GB |
dc.description.sponsorship | National Institute of Health | en_GB |
dc.description.sponsorship | Swedish Research Council | en_GB |
dc.description.sponsorship | Swedish Research Council | en_GB |
dc.description.sponsorship | UK Research and Innovation (UKRI) | en_GB |
dc.description.sponsorship | Medical Research Council | en_GB |
dc.description.sponsorship | Wellcome Trust | en_GB |
dc.format.extent | 1-11 | |
dc.format.medium | Print-Electronic | |
dc.identifier.citation | Published online 8 June 2023 | en_GB |
dc.identifier.doi | https://doi.org/10.1038/s41588-023-01408-9 | |
dc.identifier.grantnumber | 2020-02191 | en_GB |
dc.identifier.grantnumber | NNF18CC0034900 | en_GB |
dc.identifier.grantnumber | R01 DK062370 | en_GB |
dc.identifier.grantnumber | ZIA HG000024 | en_GB |
dc.identifier.grantnumber | T32HL129982 | en_GB |
dc.identifier.grantnumber | PH-099-PP-03 | en_GB |
dc.identifier.grantnumber | PH-100-PP-03 | en_GB |
dc.identifier.grantnumber | PH-101-PP-03 | en_GB |
dc.identifier.grantnumber | NSC 101-2314-B-075A-006- MY3 | en_GB |
dc.identifier.grantnumber | MOST 104-2314-B-075A-006-MY3 | en_GB |
dc.identifier.grantnumber | MOST 104- 2314-B-075A-007 | en_GB |
dc.identifier.grantnumber | MOST 105-2314-B-075A-003 | en_GB |
dc.identifier.grantnumber | TCVGH-1020101C | en_GB |
dc.identifier.grantnumber | TCVGH-1020102D | en_GB |
dc.identifier.grantnumber | TCVGH1023102B | en_GB |
dc.identifier.grantnumber | TCVGH-1023107D | en_GB |
dc.identifier.grantnumber | TCVGH-1030101C | en_GB |
dc.identifier.grantnumber | TCVGH-1030105D | en_GB |
dc.identifier.grantnumber | TCVGH-1033503C | en_GB |
dc.identifier.grantnumber | TCVGH1033102B | en_GB |
dc.identifier.grantnumber | TCVGH-1033108D | en_GB |
dc.identifier.grantnumber | TCVGH-1040101C | en_GB |
dc.identifier.grantnumber | TCVGH-1040102D | en_GB |
dc.identifier.grantnumber | TCVGH1033102B | en_GB |
dc.identifier.grantnumber | TCVGH-1033108D | en_GB |
dc.identifier.grantnumber | TCVGH-1040101C | en_GB |
dc.identifier.grantnumber | TCVGH-1040102D | en_GB |
dc.identifier.grantnumber | TCVGH-1043504C | en_GB |
dc.identifier.grantnumber | TCVGH1043104B | en_GB |
dc.identifier.grantnumber | U01 DK078616 | en_GB |
dc.identifier.grantnumber | R01 HL151855 | en_GB |
dc.identifier.grantnumber | 2015-03477 | en_GB |
dc.identifier.grantnumber | 2018-02784 | en_GB |
dc.identifier.grantnumber | MR/S007091/1 | en_GB |
dc.identifier.grantnumber | MC_UU_00006/1 | en_GB |
dc.identifier.grantnumber | 221782/Z/20/Z | en_GB |
dc.identifier.uri | http://hdl.handle.net/10871/133423 | |
dc.identifier | ORCID: 0000-0001-8362-2603 (Frayling, Timothy M) | |
dc.identifier | ORCID: 0000-0001-5800-4520 (Barroso, Inês) | |
dc.language.iso | en | en_GB |
dc.publisher | Nature Research | en_GB |
dc.relation.url | https://www.ncbi.nlm.nih.gov/pubmed/37291194 | en_GB |
dc.relation.url | https://magicinvestigators.org/downloads/ | en_GB |
dc.relation.url | https://www.ebi.ac.uk/gwas/home | en_GB |
dc.relation.url | https://www.mrc-epid.cam.ac.uk/research/studies/fenland/information-for-researchers/ | en_GB |
dc.relation.url | https://www.ukbiobank.ac.uk | en_GB |
dc.relation.url | http://www.egir.org/egirrisc/ | en_GB |
dc.relation.url | https://www.gtexportal.org/home/ | en_GB |
dc.relation.url | https://www.encodeproject.org/ | en_GB |
dc.relation.url | https://egg2.wustl.edu/roadmap/web_portal/ | en_GB |
dc.relation.url | http://genome.ucsc.edu | en_GB |
dc.relation.url | https://www.ncbi.nlm.nih.gov/geo/ | en_GB |
dc.relation.url | http://csg.sph.umich.edu/abecasis/Metal/download/ | en_GB |
dc.relation.url | https://github.com/explodecomputer/random-metal | en_GB |
dc.relation.url | https://github.com/bulik/ldsc | en_GB |
dc.relation.url | https://www.r-project.org/ | en_GB |
dc.relation.url | https://cran.r-project.org/web/packages/coloc/ | en_GB |
dc.relation.url | https://github.com/jrs95/hyprcoloc | en_GB |
dc.relation.url | https://yanglab.westlake.edu.cn/software/gcta/#Overview | en_GB |
dc.relation.url | https://www.uni-regensburg.de/medizin/epidemiologie-praeventivmedizin/genetische-epidemiologie/software/index.html | en_GB |
dc.relation.url | https://github.com/MRC-Epid/GWAS_postchallenge_insulin | en_GB |
dc.relation.url | https://zenodo.org/record/7805583#.ZC7C_exBxhE | en_GB |
dc.rights.embargoreason | Under embargo until 8 December 2023 in compliance with publisher policy | en_GB |
dc.rights | © 2023, The Author(s), under exclusive licence to Springer Nature America, Inc. | en_GB |
dc.subject | Gene expression | en_GB |
dc.subject | Genome-wide association studies | en_GB |
dc.subject | Metabolic disorders | en_GB |
dc.subject | Population genetics | en_GB |
dc.subject | Type 2 diabetes | en_GB |
dc.title | Genome-wide association study and functional characterization identifies candidate genes for insulin-stimulated glucose uptake. | en_GB |
dc.type | Article | en_GB |
dc.date.available | 2023-06-19T13:58:53Z | |
dc.identifier.issn | 1061-4036 | |
exeter.place-of-publication | United States | |
dc.description | This is the author accepted manuscript. The final version is available from Nature Research via the DOI in this record | en_GB |
dc.description | Data Availability:
GWAS summary statistics will be made available on the MAGIC Investigators
Website (https://magicinvestigators.org/downloads/) and GWAS catalog
(https://www.ebi.ac.uk/gwas/home): GCST90267567, GCST90267568, GCST90267569,
GCST90267570, GCST90267571, GCST90267572, GCST90267573, GCST90267574,
GCST90267575, GCST90267576, GCST90267577, GCST90267578. | en_GB |
dc.description | Data from the Fenland cohort can be requested by bona fide researchers for specified scientific purposes via the study website (https://www.mrc-epid.cam.ac.uk/research/studies/fenland/information-for-researchers/). Data will either be shared through an institutional data-sharing agreement or arrangements will be made for analyses to be conducted remotely without the necessity for data transfer. | en_GB |
dc.description | All data used in genetic risk score association analyses are available from the UK Biobank upon application (https://www.ukbiobank.ac.uk). All analyses in the UK Biobank in this manuscript were conducted under application 44448. Further details about the RISC study and data availability can be found here: http://www.egir.org/egirrisc/. The Genotype-Tissue Expression (GTEx) Project was supported by the Common Fund of the Office of the Director of the National Institutes of Health, and by NCI, NHGRI, NHLBI, NIDA, NIMH and NINDS. The data used for the analyses described in this manuscript can be obtained from the GTEx Portal (https://www.gtexportal.org/home/) and dbGaP accession number phs000424.v8.p2. Genome regulatory annotations from ENCODE (https://www.encodeproject.org/) and Roadmap Epigenomics Consortium (https://egg2.wustl.edu/roadmap/web_portal/) were explored via UCSC Genome Browser (http://genome.ucsc.edu). Published differentiated 3T3-L1 RNA-sequencing data used in this study are available from GEO accession GSE129957 (https://www.ncbi.nlm.nih.gov/geo/). Source data are provided with this paper. | en_GB |
dc.description | Code availability:
No previously unreported custom code or algorithm was used to generate results. The following software and packages were used for data analysis: METAL v.2011-03-25 (http://csg.sph.umich.edu/abecasis/Metal/download/), random-metal v.2017-07-24 (https://github.com/explodecomputer/random-metal), linkage disequilibrium score regression v.1.0.1 (https://github.com/bulik/ldsc), R v.3.6.0 and v.4.0.3 (https://www.r-project.org/). R packages coloc v.5.1.0 (https://cran.r-project.org/web/packages/coloc/).
Hyprcoloc v.1.0 (https://github.com/jrs95/hyprcoloc).
GCTA 1.26.0 (https://yanglab.westlake.edu.cn/software/gcta/#Overview). EasyQC v.17.8 (https://www.uni-regensburg.de/medizin/epidemiologie-praeventivmedizin/genetische-epidemiologie/software/index.html). Associated code and scripts used in this manuscript are available on GitHub: https://github.com/MRC-Epid/GWAS_postchallenge_insulin (https://zenodo.org/record/7805583#.ZC7C_exBxhE). | en_GB |
dc.identifier.eissn | 1546-1718 | |
dc.identifier.journal | Nature Genetics | en_GB |
dc.relation.ispartof | Nat Genet | |
dc.rights.uri | http://www.rioxx.net/licenses/all-rights-reserved | en_GB |
dcterms.dateAccepted | 2023-04-26 | |
rioxxterms.version | AM | en_GB |
rioxxterms.licenseref.startdate | 2023-06-08 | |
rioxxterms.type | Journal Article/Review | en_GB |
refterms.dateFCD | 2023-06-19T13:16:43Z | |
refterms.versionFCD | AM | |
refterms.dateFOA | 2023-12-08T00:00:00Z | |
refterms.panel | A | en_GB |
refterms.dateFirstOnline | 2023-06-08 | |