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dc.contributor.authorWilliamson, A
dc.contributor.authorNorris, DM
dc.contributor.authorYin, X
dc.contributor.authorBroadaway, KA
dc.contributor.authorMoxley, AH
dc.contributor.authorVadlamudi, S
dc.contributor.authorWilson, EP
dc.contributor.authorJackson, AU
dc.contributor.authorAhuja, V
dc.contributor.authorAndersen, MK
dc.contributor.authorArzumanyan, Z
dc.contributor.authorBonnycastle, LL
dc.contributor.authorBornstein, SR
dc.contributor.authorBretschneider, MP
dc.contributor.authorBuchanan, TA
dc.contributor.authorChang, Y-C
dc.contributor.authorChuang, L-M
dc.contributor.authorChung, R-H
dc.contributor.authorClausen, TD
dc.contributor.authorDamm, P
dc.contributor.authorDelgado, GE
dc.contributor.authorde Mello, VD
dc.contributor.authorDupuis, J
dc.contributor.authorDwivedi, OP
dc.contributor.authorErdos, MR
dc.contributor.authorSilva, LF
dc.contributor.authorFrayling, TM
dc.contributor.authorGieger, C
dc.contributor.authorGoodarzi, MO
dc.contributor.authorGuo, X
dc.contributor.authorGustafsson, S
dc.contributor.authorHakaste, L
dc.contributor.authorHammar, U
dc.contributor.authorHatem, G
dc.contributor.authorHerrmann, S
dc.contributor.authorHøjlund, K
dc.contributor.authorHorn, K
dc.contributor.authorHsueh, WA
dc.contributor.authorHung, Y-J
dc.contributor.authorHwu, C-M
dc.contributor.authorJonsson, A
dc.contributor.authorKårhus, LL
dc.contributor.authorKleber, ME
dc.contributor.authorKovacs, P
dc.contributor.authorLakka, TA
dc.contributor.authorLauzon, M
dc.contributor.authorLee, I-T
dc.contributor.authorLindgren, CM
dc.contributor.authorLindström, J
dc.contributor.authorLinneberg, A
dc.contributor.authorLiu, C-T
dc.contributor.authorLuan, J
dc.contributor.authorAly, DM
dc.contributor.authorMathiesen, E
dc.contributor.authorMoissl, AP
dc.contributor.authorMorris, AP
dc.contributor.authorNarisu, N
dc.contributor.authorPerakakis, N
dc.contributor.authorPeters, A
dc.contributor.authorPrasad, RB
dc.contributor.authorRodionov, RN
dc.contributor.authorRoll, K
dc.contributor.authorRundsten, CF
dc.contributor.authorSarnowski, C
dc.contributor.authorSavonen, K
dc.contributor.authorScholz, M
dc.contributor.authorSharma, S
dc.contributor.authorStinson, SE
dc.contributor.authorSuleman, S
dc.contributor.authorTan, J
dc.contributor.authorTaylor, KD
dc.contributor.authorUusitupa, M
dc.contributor.authorVistisen, D
dc.contributor.authorWitte, DR
dc.contributor.authorWalther, R
dc.contributor.authorWu, P
dc.contributor.authorXiang, AH
dc.contributor.authorZethelius, B
dc.contributor.authorMeta-Analysis of Glucose and Insulin-related Traits Consortium (MAGIC)
dc.contributor.authorAhlqvist, E
dc.contributor.authorBergman, RN
dc.contributor.authorChen, Y-DI
dc.contributor.authorCollins, FS
dc.contributor.authorFall, T
dc.contributor.authorFlorez, JC
dc.contributor.authorFritsche, A
dc.contributor.authorGrallert, H
dc.contributor.authorGroop, L
dc.contributor.authorHansen, T
dc.contributor.authorKoistinen, HA
dc.contributor.authorKomulainen, P
dc.contributor.authorLaakso, M
dc.contributor.authorLind, L
dc.contributor.authorLoeffler, M
dc.contributor.authorMärz, W
dc.contributor.authorMeigs, JB
dc.contributor.authorRaffel, LJ
dc.contributor.authorRauramaa, R
dc.contributor.authorRotter, JI
dc.contributor.authorSchwarz, PEH
dc.contributor.authorStumvoll, M
dc.contributor.authorSundström, J
dc.contributor.authorTönjes, A
dc.contributor.authorTuomi, T
dc.contributor.authorTuomilehto, J
dc.contributor.authorWagner, R
dc.contributor.authorBarroso, I
dc.contributor.authorWalker, M
dc.contributor.authorGrarup, N
dc.contributor.authorBoehnke, M
dc.contributor.authorWareham, NJ
dc.contributor.authorMohlke, KL
dc.contributor.authorWheeler, E
dc.contributor.authorO'Rahilly, S
dc.contributor.authorFazakerley, DJ
dc.contributor.authorLangenberg, C
dc.date.accessioned2023-06-19T13:58:53Z
dc.date.issued2023-06-08
dc.date.updated2023-06-19T10:42:43Z
dc.description.abstractDistinct tissue-specific mechanisms mediate insulin action in fasting and postprandial states. Previous genetic studies have largely focused on insulin resistance in the fasting state, where hepatic insulin action dominates. Here we studied genetic variants influencing insulin levels measured 2 h after a glucose challenge in >55,000 participants from three ancestry groups. We identified ten new loci (P < 5 × 10-8) not previously associated with postchallenge insulin resistance, eight of which were shown to share their genetic architecture with type 2 diabetes in colocalization analyses. We investigated candidate genes at a subset of associated loci in cultured cells and identified nine candidate genes newly implicated in the expression or trafficking of GLUT4, the key glucose transporter in postprandial glucose uptake in muscle and fat. By focusing on postprandial insulin resistance, we highlighted the mechanisms of action at type 2 diabetes loci that are not adequately captured by studies of fasting glycemic traits.en_GB
dc.description.sponsorshipSwedish Research Councilen_GB
dc.description.sponsorshipNovo Nordisk Foundationen_GB
dc.description.sponsorshipNational Institute of Healthen_GB
dc.description.sponsorshipNational Institute of Healthen_GB
dc.description.sponsorshipNational Institute of Healthen_GB
dc.description.sponsorshipNational Health Research Institutes, Taiwanen_GB
dc.description.sponsorshipNational Health Research Institutes, Taiwanen_GB
dc.description.sponsorshipNational Health Research Institutes, Taiwanen_GB
dc.description.sponsorshipNational Science Council, Taiwanen_GB
dc.description.sponsorshipNational Science Council, Taiwanen_GB
dc.description.sponsorshipNational Science Council, Taiwanen_GB
dc.description.sponsorshipNational Science Council, Taiwanen_GB
dc.description.sponsorshipTaichung Veterans General Hospital, Taiwanen_GB
dc.description.sponsorshipTaichung Veterans General Hospital, Taiwanen_GB
dc.description.sponsorshipTaichung Veterans General Hospital, Taiwanen_GB
dc.description.sponsorshipTaichung Veterans General Hospital, Taiwanen_GB
dc.description.sponsorshipTaichung Veterans General Hospital, Taiwanen_GB
dc.description.sponsorshipTaichung Veterans General Hospital, Taiwanen_GB
dc.description.sponsorshipTaichung Veterans General Hospital, Taiwanen_GB
dc.description.sponsorshipTaichung Veterans General Hospital, Taiwanen_GB
dc.description.sponsorshipTaichung Veterans General Hospital, Taiwanen_GB
dc.description.sponsorshipTaichung Veterans General Hospital, Taiwanen_GB
dc.description.sponsorshipTaichung Veterans General Hospital, Taiwanen_GB
dc.description.sponsorshipTaichung Veterans General Hospital, Taiwanen_GB
dc.description.sponsorshipTaichung Veterans General Hospital, Taiwanen_GB
dc.description.sponsorshipTaichung Veterans General Hospital, Taiwanen_GB
dc.description.sponsorshipTaichung Veterans General Hospital, Taiwanen_GB
dc.description.sponsorshipTaichung Veterans General Hospital, Taiwanen_GB
dc.description.sponsorshipTaichung Veterans General Hospital, Taiwanen_GB
dc.description.sponsorshipNational Institute of Healthen_GB
dc.description.sponsorshipNational Institute of Healthen_GB
dc.description.sponsorshipSwedish Research Councilen_GB
dc.description.sponsorshipSwedish Research Councilen_GB
dc.description.sponsorshipUK Research and Innovation (UKRI)en_GB
dc.description.sponsorshipMedical Research Councilen_GB
dc.description.sponsorshipWellcome Trusten_GB
dc.format.extent1-11
dc.format.mediumPrint-Electronic
dc.identifier.citationPublished online 8 June 2023en_GB
dc.identifier.doihttps://doi.org/10.1038/s41588-023-01408-9
dc.identifier.grantnumber2020-02191en_GB
dc.identifier.grantnumberNNF18CC0034900en_GB
dc.identifier.grantnumberR01 DK062370en_GB
dc.identifier.grantnumberZIA HG000024en_GB
dc.identifier.grantnumberT32HL129982en_GB
dc.identifier.grantnumberPH-099-PP-03en_GB
dc.identifier.grantnumberPH-100-PP-03en_GB
dc.identifier.grantnumberPH-101-PP-03en_GB
dc.identifier.grantnumberNSC 101-2314-B-075A-006- MY3en_GB
dc.identifier.grantnumberMOST 104-2314-B-075A-006-MY3en_GB
dc.identifier.grantnumberMOST 104- 2314-B-075A-007en_GB
dc.identifier.grantnumberMOST 105-2314-B-075A-003en_GB
dc.identifier.grantnumberTCVGH-1020101Cen_GB
dc.identifier.grantnumberTCVGH-1020102Den_GB
dc.identifier.grantnumberTCVGH1023102Ben_GB
dc.identifier.grantnumberTCVGH-1023107Den_GB
dc.identifier.grantnumberTCVGH-1030101Cen_GB
dc.identifier.grantnumberTCVGH-1030105Den_GB
dc.identifier.grantnumberTCVGH-1033503Cen_GB
dc.identifier.grantnumberTCVGH1033102Ben_GB
dc.identifier.grantnumberTCVGH-1033108Den_GB
dc.identifier.grantnumberTCVGH-1040101Cen_GB
dc.identifier.grantnumberTCVGH-1040102Den_GB
dc.identifier.grantnumberTCVGH1033102Ben_GB
dc.identifier.grantnumberTCVGH-1033108Den_GB
dc.identifier.grantnumberTCVGH-1040101Cen_GB
dc.identifier.grantnumberTCVGH-1040102Den_GB
dc.identifier.grantnumberTCVGH-1043504Cen_GB
dc.identifier.grantnumberTCVGH1043104Ben_GB
dc.identifier.grantnumberU01 DK078616en_GB
dc.identifier.grantnumberR01 HL151855en_GB
dc.identifier.grantnumber2015-03477en_GB
dc.identifier.grantnumber2018-02784en_GB
dc.identifier.grantnumberMR/S007091/1en_GB
dc.identifier.grantnumberMC_UU_00006/1en_GB
dc.identifier.grantnumber221782/Z/20/Zen_GB
dc.identifier.urihttp://hdl.handle.net/10871/133423
dc.identifierORCID: 0000-0001-8362-2603 (Frayling, Timothy M)
dc.identifierORCID: 0000-0001-5800-4520 (Barroso, Inês)
dc.language.isoenen_GB
dc.publisherNature Researchen_GB
dc.relation.urlhttps://www.ncbi.nlm.nih.gov/pubmed/37291194en_GB
dc.relation.urlhttps://magicinvestigators.org/downloads/en_GB
dc.relation.urlhttps://www.ebi.ac.uk/gwas/homeen_GB
dc.relation.urlhttps://www.mrc-epid.cam.ac.uk/research/studies/fenland/information-for-researchers/en_GB
dc.relation.urlhttps://www.ukbiobank.ac.uken_GB
dc.relation.urlhttp://www.egir.org/egirrisc/en_GB
dc.relation.urlhttps://www.gtexportal.org/home/en_GB
dc.relation.urlhttps://www.encodeproject.org/en_GB
dc.relation.urlhttps://egg2.wustl.edu/roadmap/web_portal/en_GB
dc.relation.urlhttp://genome.ucsc.eduen_GB
dc.relation.urlhttps://www.ncbi.nlm.nih.gov/geo/en_GB
dc.relation.urlhttp://csg.sph.umich.edu/abecasis/Metal/download/en_GB
dc.relation.urlhttps://github.com/explodecomputer/random-metalen_GB
dc.relation.urlhttps://github.com/bulik/ldscen_GB
dc.relation.urlhttps://www.r-project.org/en_GB
dc.relation.urlhttps://cran.r-project.org/web/packages/coloc/en_GB
dc.relation.urlhttps://github.com/jrs95/hyprcolocen_GB
dc.relation.urlhttps://yanglab.westlake.edu.cn/software/gcta/#Overviewen_GB
dc.relation.urlhttps://www.uni-regensburg.de/medizin/epidemiologie-praeventivmedizin/genetische-epidemiologie/software/index.htmlen_GB
dc.relation.urlhttps://github.com/MRC-Epid/GWAS_postchallenge_insulinen_GB
dc.relation.urlhttps://zenodo.org/record/7805583#.ZC7C_exBxhEen_GB
dc.rights.embargoreasonUnder embargo until 8 December 2023 in compliance with publisher policyen_GB
dc.rights© 2023, The Author(s), under exclusive licence to Springer Nature America, Inc.en_GB
dc.subjectGene expressionen_GB
dc.subjectGenome-wide association studiesen_GB
dc.subjectMetabolic disordersen_GB
dc.subjectPopulation geneticsen_GB
dc.subjectType 2 diabetesen_GB
dc.titleGenome-wide association study and functional characterization identifies candidate genes for insulin-stimulated glucose uptake.en_GB
dc.typeArticleen_GB
dc.date.available2023-06-19T13:58:53Z
dc.identifier.issn1061-4036
exeter.place-of-publicationUnited States
dc.descriptionThis is the author accepted manuscript. The final version is available from Nature Research via the DOI in this record en_GB
dc.descriptionData Availability: GWAS summary statistics will be made available on the MAGIC Investigators Website (https://magicinvestigators.org/downloads/) and GWAS catalog (https://www.ebi.ac.uk/gwas/home): GCST90267567, GCST90267568, GCST90267569, GCST90267570, GCST90267571, GCST90267572, GCST90267573, GCST90267574, GCST90267575, GCST90267576, GCST90267577, GCST90267578.en_GB
dc.descriptionData from the Fenland cohort can be requested by bona fide researchers for specified scientific purposes via the study website (https://www.mrc-epid.cam.ac.uk/research/studies/fenland/information-for-researchers/). Data will either be shared through an institutional data-sharing agreement or arrangements will be made for analyses to be conducted remotely without the necessity for data transfer.en_GB
dc.descriptionAll data used in genetic risk score association analyses are available from the UK Biobank upon application (https://www.ukbiobank.ac.uk). All analyses in the UK Biobank in this manuscript were conducted under application 44448. Further details about the RISC study and data availability can be found here: http://www.egir.org/egirrisc/. The Genotype-Tissue Expression (GTEx) Project was supported by the Common Fund of the Office of the Director of the National Institutes of Health, and by NCI, NHGRI, NHLBI, NIDA, NIMH and NINDS. The data used for the analyses described in this manuscript can be obtained from the GTEx Portal (https://www.gtexportal.org/home/) and dbGaP accession number phs000424.v8.p2. Genome regulatory annotations from ENCODE (https://www.encodeproject.org/) and Roadmap Epigenomics Consortium (https://egg2.wustl.edu/roadmap/web_portal/) were explored via UCSC Genome Browser (http://genome.ucsc.edu). Published differentiated 3T3-L1 RNA-sequencing data used in this study are available from GEO accession GSE129957 (https://www.ncbi.nlm.nih.gov/geo/). Source data are provided with this paper.en_GB
dc.descriptionCode availability: No previously unreported custom code or algorithm was used to generate results. The following software and packages were used for data analysis: METAL v.2011-03-25 (http://csg.sph.umich.edu/abecasis/Metal/download/), random-metal v.2017-07-24 (https://github.com/explodecomputer/random-metal), linkage disequilibrium score regression v.1.0.1 (https://github.com/bulik/ldsc), R v.3.6.0 and v.4.0.3 (https://www.r-project.org/). R packages coloc v.5.1.0 (https://cran.r-project.org/web/packages/coloc/). Hyprcoloc v.1.0 (https://github.com/jrs95/hyprcoloc). GCTA 1.26.0 (https://yanglab.westlake.edu.cn/software/gcta/#Overview). EasyQC v.17.8 (https://www.uni-regensburg.de/medizin/epidemiologie-praeventivmedizin/genetische-epidemiologie/software/index.html). Associated code and scripts used in this manuscript are available on GitHub: https://github.com/MRC-Epid/GWAS_postchallenge_insulin (https://zenodo.org/record/7805583#.ZC7C_exBxhE).en_GB
dc.identifier.eissn1546-1718
dc.identifier.journalNature Geneticsen_GB
dc.relation.ispartofNat Genet
dc.rights.urihttp://www.rioxx.net/licenses/all-rights-reserveden_GB
dcterms.dateAccepted2023-04-26
rioxxterms.versionAMen_GB
rioxxterms.licenseref.startdate2023-06-08
rioxxterms.typeJournal Article/Reviewen_GB
refterms.dateFCD2023-06-19T13:16:43Z
refterms.versionFCDAM
refterms.panelAen_GB
refterms.dateFirstOnline2023-06-08


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